alignment

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Alignment API - 3.3

Alignment API is a development tool that allows various ontology matchers to share the same format and interface.





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Current Version: 3.3
License: Freeware
Downloads: 10


More on Alignment
PocketBalls 2.2Data Added 1: February 22, 2010   
PocketBalls is a classic Russian game of ball alignment. The game starts out with 3 randomly colored balls placed in 3 random locations on the main board. The user then takes a turn to move a single ball either horizontally or vertically (given there is a clear path to a chosen spot on the board) to try and align the same colored balls either horizontally, vertically, or diagonally. When a specified number of balls are aligned, they are removed from the game and points are awarded to the...
Size: 210.0 KB License: Demo Price: $4.95 
Keywords: Alignment - Applications - Arcade - Axim - Ball - Balls - Business - Game - Games - Handheld



ABBYY Aligner 1.0Data Added 1: April 29, 2010   
ABBYY Aligner. Aligning Parallel Texts Alignment Translation Memory.
ABBYY Aligner is a professional tool for aligning parallel texts in various languages and creating Translation Memory (TM) databases. Based on ABBYY's foremost linguistic technologies and special dictionary databases, the program accurately finds matching segments in the source and translated texts by checking their semantic proximity and allows saving the results in the TM database for further use in Computer Assisted Translation (CAT) tools. It helps to reduce costs yet increase the quality...
Size: 146.5 MB License: Shareware Price: $155 
Keywords: Aligning Parallel Texts - Alignment - Translation Memory - Translation Tools



Sync Assistant 1.21Data Added 1: June 18, 2010   
Sync Assistant. Align Alignment Compare.
Sync Assistant is an ergonomic tool to compare two directories or directory trees and assist with file alignment. A typical utilization of Sync Assistant is when you want to keep a copy of your data files (which you frequently create or update) in a different disk (hard or floppy) for backup purpose. By the way, It is strongly recommended to do that as a daily habit, as the hard disk of your PC will crash sooner or later, without any prior warning. Sync Assistant compares two directory...
Size: 1.5 MB License: Shareware Price: $15 
Keywords: Align - Alignment - Compare - Directory - File - Folder - Mirror - Mirroring - Sync - Synchronization



micro-read Fast Alignment Search Tool 2.1.0.6Data Added 1: April 28, 2012   
Fast Alignment Search Tool suite. A fast sequence read mapper suite for short reads generated with the Illumina platform. Contains mrFAST and mrsFAST. Joint development by University of Washington and Simon Fraser University
Size: 39.6 KB License: Freeware 


cross-species alignment tool 0.8.6Data Added 1: May 04, 2012   
Xat is named after X-species Alignment Tool. It is designed to be a cross-species cDNA-to-genome alignment software. It is fast and accurate, and optimized for genome-wide mapping.
Size: 84.9 KB License: Freeware 


di-base read Fast Alignment Search Tool 1.0.0.0Data Added 1: June 30, 2012   
Fast Alignment Search Tool for di-base reads (color-space; AB SOLiD). A complementary program for the popular Illumina read mappers mrFAST and mrsFAST.
Size: 49.8 KB License: Freeware 


Protein ALignment Optimizer 1.0Data Added 1: September 06, 2012   
Protein ALignment Optimizer. .
Protein ALignment Optimiser (PALO) is a script for the selection and alignment of the best combination of transcripts among orthologous genes. PALO is mainly written in Python, although other programming languages are also implemented (R, Perl...).
Size: 32.6 KB License: Freeware 


Zoomable Sequence Alignment Editor 0.0.1Data Added 1: August 08, 2012   
ZAE is a Zoomable multiple sequence Alignment Editor
Size: 310.5 KB License: Freeware 


CodonCode Aligner Sequence Assembler 3. 7. 2001Data Added 1: April 08, 2012   
CodonCode Aligner Sequence Assembler. Ab1 Abi Aligner.
CodonCode Aligner is user-friendly software for DNA sequence assembly, alignment, contig editing, and mutation detection. In addition to features common in sequence assembly programs like end clipping, alignments to reference sequences, and exporting, CodonCode Aligner offers many unique features not found in other software. Advanced CodonCode Aligner features include: - Assemble by name: build hundreds of contigs in seconds, based on sample names - Accurate consensus sequences based on...
Size: 34.2 MB License: Freeware Price: $720 
Keywords: Ab1 - Abi - Aligner - Alignment - Analysis - Assembly - Consensus - Contig - Fasta - Mac



FP-WindowManager 0.3Data Added 1: April 17, 2012   
Offers tools to easily manage windows, including automatic alignment and sizing, pinning and unpinning (set on top), shortcuts to stack and view side by side and shortcuts to change size and position. FEATURES: A automatic window alignment and sizing A pin and unpin windows A stack all windows A arrange windows side by side A change size and position of windows via shortcuts A all shortcuts customizable
Size: 481.0 KB License: Freeware 
Keywords: Adjust - Alignment - Customize Window - Manage Window - Size - Window Adjustment



Open3DALIGN x64 2.105Data Added 1: July 23, 2012   
Open3DALIGN x64. Alignment Compund Dataset Compound.
Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is installed on the system while Open3DALIGN is being operated interactively, the setup of alignments can be followed in real time on PyMOL's viewport. A typical workflow could be the...
Size: 5.2 MB License: Freeware 
Keywords: Alignment - Compund - Dataset Compound - Molecular Alignment - Molecular Dynamics - Molecule



Open3DALIGN 2.105Data Added 1: June 18, 2012   
Open3DALIGN. Alignment Compund Dataset Compound.
Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is installed on the system while Open3DALIGN is being operated interactively, the setup of alignments can be followed in real time on PyMOL's viewport. A typical workflow could be the...
Size: 4.1 MB License: Freeware 
Keywords: Alignment - Compund - Dataset Compound - Molecular Alignment - Molecular Dynamics - Molecule



INDI alignment infrastructure 1.0Data Added 1: June 19, 2013   
Provides an "alignment layer" driver to sit above INDI telescope drivers. This layer performs transformation services for telescope coordinates as they pass up and down to the underlying driver. The conversion matrices are computed from alignment datums passed down into the alignment layer. The N point alignment model can be used for both equatorial and alt azimuth mounts.The alignment database and coordinate conversion functionality is isolated in a separate class library module...
Size: License: Freeware 


Swift Sequence Alignment Program 0.11.2Data Added 1: May 22, 2013   
Swift Sequence Alignment Program. .
Swift is a DNA sequence alignment program that produces gapped alignment using the Smith-Waterman algorithm. It takes in a query file (FASTA format) and a reference file (FASTA format) as input. It outputs the reference name, read name, gapped alignment, alignment score, alignment start and end positions, and alignment length. I gave a talk on Swift in the GPU Technology Conference 2012. The talk can be accessed at...
Size: 466.9 KB License: Freeware 


MSAProbs: Multiple Sequence Alignment 0.9.7Data Added 1: April 02, 2013   
MSAProbs is an open-source protein multiple sequence ailgnment algorithm, achieving the stastistically highest alignment accuracy on popular benchmarks: BALIBASE, PREFAB, SABMARK, OXBENCH, compared to ClustalW, MAFFT, MUSCLE, ProbCons and Probalign. GNU General Public License version 3.0 (GPLv3)
Size: 930.2 KB License: Freeware 


Protein Family Alignment Annotation Tool 1.0Data Added 1: April 23, 2013   
PFAAT is a Java-based multiple sequence alignment editor and viewer designed for protein family analysis. You can download PFAAT from http://pfaat.sourceforge.net/ GNU General Public License version 2.0 (GPLv2)
Size: License: Freeware 


Best Reciprocal Hit from BLAST alignment 1.0Data Added 1: March 23, 2013   
Windows command line utility calculating protein orthologs using best reciprocal hit from BLAST alignment output -d specifies directory with BLAST outputs. All files will be used as input for the ParseBLAST.exe -s Similarity cutoff (0.3 is recommended) -b Y/N specifies how to calculate orthologs. Y - for best reciprocal hit; N - for all possible homologs above similarity cutoff Academic Free License (AFL)
Size: License: Freeware 


FSA For Linux 1.15.6Data Added 1: August 31, 2013   
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.
Size: 9.6 MB License: Freeware 
Keywords: Aligning - Alignment - Approach - Homologous - Multiple - Protein - Quotdistancebasedquot - Sequence - Sequences



Bankside Drive Auto Body And Wheel Alignment - Cathedral City 2.0.0Data Added 1: June 11, 2014   
Bankside Drive Auto Body And Wheel Alignment - Cathedral City. .
The Bankside Drive Auto Body And Wheel Alignment App is an easy-to-use, free mobile app created to stay informed and connected with us every day through a variety of great features. This fantastic interactive app provides you with the following innovative features: -Quick Contact- Quick contact features including click-to-call, map directions, and e-mail. -Share- Easy to share with Friends on Facebook & Twitter with a press of a button. - Appointments - Experience Hassle-Free Appointment...
Size: 5.9 MB License: Freeware 


Resource Alignment Matrix 1.5Data Added 1: May 31, 2014   
Resource Alignment Matrix. .
Resource Alignment Matrix now delivers 3 times the value - as a comprehensive & objective staff ranking tool, as your ticket to the secrets of Robust Production Management (RPM), & as your personal fast track to RPM certification. FIRST... the Resource Alignment Matrix - or "RAM" app - objectively ranks individual team members according to their skills and work performance. Supervisors and managers can quickly and easily identify specific team member development opportunities, as...
Size: 15.3 MB License: Shareware Price: $0.99 


DC Form Flipper 3.71Data Added 1: April 17, 2012   
DC Form Flipper. Eastern Language Form Alignment Form Flipper.
Form Flipper is the perfect program for those who write multi-language applications. This COM-based software adjusts your form's alignment and orientation to support languages that use nonstandard layouts, such as right to left. It is designed to work with Form Translator, which automatically translates a finished form into languages. With Form Flipper, you can easily sell your application to international markets and better communicate your trade. Rather than rewrite a whole new code, Form...
Size: 885.3 KB License: Shareware Price: $149 
Keywords: Eastern Language - Form Alignment - Form Flipper - Form Flipping - Right Orientation



FlexLabel 1.1Data Added 1: June 21, 2007   
FlexLabel. Activex Control Label.
FlexLabel is an enhanced label control...way enhanced! You have complete control over everything including font, alignment, mouse-over effect, and angle of text, plus the best functionality is that it will automatically create a hyperlink based off of simple property settings. You can control whether a mouse click will link to email, a website, an FTP site, or user customizable link.
Size: 270.5 KB License: Shareware Price: $49.95 
Keywords: Activex - Control - Label - Vb6



Professional News Ticker Applet 3.2Data Added 1: May 24, 2007   
Professional News Ticker Applet. Applet Fade Effect Java.
News Ticker Features: Vertical news ticker applet. Customizable fonts, color, alignment. Configurable Back image position. Easy to use
Size: 3.7 KB License: Shareware Price: $19 
Keywords: Applet - Fade Effect - Java - Java Applet - News Ticker - Newsticker Applet - Text Scroll - Ticker - Ticker Applet - Vertical Scroll



BioSeqAnalyzer 1.0Data Added 1: June 21, 2007   
BioSeqAnalyzer. Acgt Affine Alignment Alignment.
BioSeqAnalyzer is a bioinformatics software tool for analyzing DNA and protein sequences. Its Windows interface makes sequence analysis extremely easy. BioSeqAnalyzer, registered version, supports the following operations: Alignment Scoring. Linear global alignment. Affine global alignment. Local alignment. Multiple alignment. Hidden Markov Models Profile creation. Aligning to Hidden Markov Models Profiles. Composition-based...
Size: 566.9 KB License: Shareware Price: $30 
Keywords: Acgt - Affine Alignment - Alignment - Bioinformatics - Bioseqanalyzer - Biotechnology - Dna - Global Alignment - Hidden Markov Models - Local Alignment



Calendar Wizard 2.3.2Data Added 1: June 21, 2007   
Calendar Wizard. Adobe Pdf Bmp Calendar.
Calendar Wizard tool is used for creation of custom calendars. The created calendars can be as complex as you want to. Lets you to: create multi-lingual calendars for month or year; make the months alignment variable; choose type of a month's representation; pick and note any dates; use any color styles suitable for you; preview on any stage; split items of days and the calendar grid lines into different layers. List of available plug-ins: Corel Draw, MS Excel, JPEG, BMP, PDF, HTML, TXT.
Size: 1.6 MB License: Shareware Price: $29.95 
Keywords: Adobe Pdf - Bmp - Calendar - Cmyk - Color Model - Corel Draw - Date - Design - Excel - Grid



Ap Text To PDF 2.2Data Added 1: June 21, 2007   
Ap Text To PDF. Acrobat Adobe Pdf File Batch Convert.
Text To PDF ( txt2pdf ) is a program to convert ASCII texts into PDF format with a minimum loss of formatting information. support command line, batch convert, encryption, page orientation,font setting etc. .Searchable text base on the generated PDF files. .Force font size, font name, font color and paper size. .Ability to process reports that do not contain form feeds. .Acrobat compatible encryption and rights protection. .Supports command line operation (for manual use or inclusion in...
Size: 584.1 KB License: Freeware 
Keywords: Acrobat - Adobe Pdf File - Batch Convert - Command Line - Encryption - Orientation - Page Alignment - Pdf Protect - Rotation - Searchable Text



GetPDF Page Numberer 2.03Data Added 1: August 09, 2007   
GetPDF Page Numberer. Acrobat Add Index.
Numbering PDF pages with features including setting prefix and suffix for page number, setting page range for processing, defining start and stop page counts for page groups, reversing page numbering, labeling, stamping custom text, alignment, custom position. GetPDF Page Numberer is standalone, which does not require Adobe Acrobat.
Size: 846.6 KB License: Shareware Price: $49 
Keywords: Acrobat - Add - Index - Mark - Number - Numberer - Page - Pdf



HTMLtoRTF Converter 2.4Data Added 1: June 21, 2007   
HTMLtoRTF Converter. Asp Convert Converter.
Flash-like converting multiple HTML to RTF. Support: tables, font face, size, color, alignment, hyperlinks, special characters, automatic select of coding etc. You can convert HTML into RTF with tables or transform tables to the text. You can convert many files at once. Average speed of converting in RTF - 15 files in a second. After converting RTF - files decrease twice in comparison with a DOC-format.
Size: 465.4 KB License: Shareware Price: $24 
Keywords: Asp - Convert - Converter - Converting - Htm - Html - Html2rtf - Htmltortf - Rtf - Txt



Text To PDF COM/SDK 2.2Data Added 1: June 21, 2007   
Text To PDF COM/SDK. Append Pdf Batch Convert Command Line.
Text To PDF ( txt2pdf ) is a program to convert ASCII texts into PDF format with a minimum loss of formatting information. support command line, batch convert, encryption, page orientation,font setting etc. .Searchable text base on the generated PDF files. .Force font size, font name, font color and paper size. .Ability to process reports that do not contain form feeds. .Acrobat compatible encryption and rights protection. .Extracts page alignment information. .Batch convert text files...
Size: 525.7 KB License: Shareware Price: $129 
Keywords: Append Pdf - Batch Convert - Command Line - Create Pdf Files - Encryption - Orientation - Page Alignment - Pdf Converter - Searchable Text - Text To Pdf



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Goal Alignment
Text Alignment
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